First, it appears that in each output's ./msa/_unpaired_tmp_env folder, there is an msa.sh shell script. Can I adjust this file in a way and incorporate it back into the main Boltz-2 directory so that ...

With @flowkclav's recent work on supporting configurable URL prefixes (#1357) and v2's backend being essentially a "dumb file store". We're getting dangerously close to enabling the hosting of ...